Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS08840

Experiment: 36hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO11 MOI 1
2,002,941	-		BPHYT_RS08835	0.66	-0.2
2,002,994	-		BPHYT_RS08835	0.69	+0.0
2,003,011	+		BPHYT_RS08835	0.70	+3.6
2,003,215	+		BPHYT_RS08835	0.81	-0.7
2,003,256	-		BPHYT_RS08835	0.84	+0.7
2,003,256	-		BPHYT_RS08835	0.84	+1.0
2,003,281	+		BPHYT_RS08835	0.85	-0.7
2,003,282	-		BPHYT_RS08835	0.85	+1.3
2,003,282	-		BPHYT_RS08835	0.85	-1.2
2,003,282	-		BPHYT_RS08835	0.85	-0.1
2,003,327	+		BPHYT_RS08835	0.88	+0.9
2,003,363	-		BPHYT_RS08835	0.90	-0.9
2,003,363	-		BPHYT_RS08835	0.90	-0.2
2,003,579	-				+0.5
2,003,808	+				+0.6
2,003,808	+				-0.1
2,004,360	+		BPHYT_RS08840	0.56	-2.0
2,004,456	+		BPHYT_RS08840	0.66	-1.1
2,004,457	-		BPHYT_RS08840	0.66	-0.5
2,004,646	-		BPHYT_RS08840	0.87	+0.5
2,004,700	-				+0.3
2,004,700	-				+2.3
2,004,726	+				-0.2
2,005,013	-		BPHYT_RS08845	0.14	+0.6
2,005,159	+		BPHYT_RS08845	0.34	+0.2
2,005,642	+				-1.3