Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS05460

Experiment: 36hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO11 MOI 1
1,252,635	+		BPHYT_RS05455	0.25	-1.4
1,252,635	+		BPHYT_RS05455	0.25	-2.1
1,252,636	-		BPHYT_RS05455	0.25	+1.4
1,252,766	+		BPHYT_RS05455	0.41	+0.2
1,253,338	-				+0.1
1,253,605	+		BPHYT_RS05460	0.29	+0.0
1,253,690	-		BPHYT_RS05460	0.39	-1.8
1,253,722	+		BPHYT_RS05460	0.43	-0.8
1,254,185	+				+1.1
1,254,352	+				-1.9
1,254,357	-				-0.1
1,254,357	-				-0.1
1,254,444	-				+1.4
1,254,613	+				+0.7
1,254,614	-				-1.2
1,254,652	+				-0.5
1,254,822	+				+1.1