Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS04545

Experiment: 36hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO11 MOI 1
1,051,771	+		BPHYT_RS04540	0.86	+0.7
1,051,771	+		BPHYT_RS04540	0.86	-0.4
1,051,966	+				+0.2
1,052,335	+				+0.0
1,052,915	+		BPHYT_RS04545	0.46	-3.0
1,053,005	+		BPHYT_RS04545	0.53	+1.1
1,053,006	-		BPHYT_RS04545	0.53	-0.3
1,053,093	-		BPHYT_RS04545	0.60	-0.3
1,053,156	-		BPHYT_RS04545	0.65	-1.3
1,053,288	-		BPHYT_RS04545	0.76	-0.2
1,053,319	-		BPHYT_RS04545	0.79	-1.9
1,053,846	+				-1.6
1,053,849	+				-0.5
1,053,849	+				-1.1
1,054,243	-		BPHYT_RS04550	0.38	-1.1
1,054,243	-		BPHYT_RS04550	0.38	-0.6
1,054,317	-		BPHYT_RS04550	0.44	-1.0
1,054,339	-		BPHYT_RS04550	0.45	-0.7
1,054,365	+		BPHYT_RS04550	0.47	-0.4
1,054,365	+		BPHYT_RS04550	0.47	+0.3