Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS04350

Experiment: 36hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO11 MOI 1
1,001,112	-				+0.3
1,001,122	-				-0.7
1,001,122	-				-0.1
1,001,122	-				+0.6
1,001,336	-				-4.2
1,001,355	+				-3.0
1,001,356	-				-3.3
1,001,451	-		BPHYT_RS04350	0.15	-2.7
1,001,464	+		BPHYT_RS04350	0.16	+1.4
1,001,465	-		BPHYT_RS04350	0.16	-4.6
1,001,572	+		BPHYT_RS04350	0.22	-0.6
1,001,684	-		BPHYT_RS04350	0.29	-1.9
1,001,725	+		BPHYT_RS04350	0.31	-2.6
1,001,726	-		BPHYT_RS04350	0.31	-1.1
1,001,890	+				+1.4
1,001,976	+		BPHYT_RS04350	0.46	+0.9
1,002,074	-		BPHYT_RS04350	0.51	-3.9
1,002,215	-		BPHYT_RS04350	0.60	-3.4
1,002,316	-		BPHYT_RS04350	0.65	-0.4
1,002,387	-		BPHYT_RS04350	0.70	-1.0
1,002,526	-		BPHYT_RS04350	0.78	-2.7
1,002,670	+		BPHYT_RS04350	0.86	-2.7
1,002,670	+		BPHYT_RS04350	0.86	+0.4
1,002,722	+		BPHYT_RS04350	0.89	-1.1
1,002,722	+		BPHYT_RS04350	0.89	-2.8
1,002,767	+				+3.4
1,002,769	+				-0.4
1,002,769	+				-3.5
1,002,770	-				-0.9
1,002,770	-				-0.7
1,002,770	-				+0.4