Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS00420

Experiment: 36hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO11 MOI 1
104,439	-				-0.7
104,439	-				+1.0
104,661	-				-0.6
104,725	+				+0.9
104,726	-				+1.5
104,797	+				-1.3
104,797	+				-0.8
104,835	+				+0.2
104,836	-				+0.2
104,863	+				+0.9
104,877	-				-0.1
104,877	-				-0.2
104,877	-				-1.1
104,880	+				-0.2
104,881	-				+0.5
104,888	+				-0.2
104,889	-				-0.1
104,906	+				+1.1
104,907	-				-0.8
105,060	+				-0.9
105,208	+				-0.0
105,208	+				-0.0
105,208	+				-2.4
105,209	-				-0.2
105,209	-				+0.2
105,375	+		BPHYT_RS00420	0.27	-1.6
105,661	+		BPHYT_RS00420	0.59	-0.1
105,708	+		BPHYT_RS00420	0.65	-1.0
105,820	+		BPHYT_RS00420	0.78	+0.2
105,821	-		BPHYT_RS00420	0.78	-0.3
106,019	+				-0.6
106,060	-				-0.4
106,060	-				+2.1
106,060	-				-0.1
106,060	-				-0.5
106,129	+				+0.0
106,130	-				+1.3
106,130	-				+0.3
106,170	+				-0.6
106,170	+				-0.5
106,171	-				+0.2
106,171	-				+0.5
106,171	-				+0.4
106,324	-				-0.7
106,416	-				+1.9
106,427	+				+0.5
106,427	+				-1.1
106,428	-				+0.2
106,429	+				-1.2
106,437	-				-0.8
106,437	-				-0.8
106,443	-				-0.2
106,566	+				-0.2
106,567	-				-0.3
106,567	-				-1.8
106,660	+				+0.4
106,661	-				-0.2
106,664	+				-1.4
106,664	+				+0.2
106,665	-				-0.3
106,665	-				-0.5