Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS00350

Experiment: 36hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO11 MOI 1
86,527	+		BPHYT_RS00345	0.49	+0.2
86,527	+		BPHYT_RS00345	0.49	-0.5
86,672	-		BPHYT_RS00345	0.60	-0.6
86,672	-		BPHYT_RS00345	0.60	-0.8
86,698	+		BPHYT_RS00345	0.62	-1.5
86,698	+		BPHYT_RS00345	0.62	+1.3
86,728	+		BPHYT_RS00345	0.65	-0.2
86,729	-		BPHYT_RS00345	0.65	-0.1
86,912	+		BPHYT_RS00345	0.80	-1.1
86,913	-		BPHYT_RS00345	0.80	+0.5
86,916	-		BPHYT_RS00345	0.80	+0.2
86,916	-		BPHYT_RS00345	0.80	+0.8
86,941	+		BPHYT_RS00345	0.82	-0.5
86,942	-		BPHYT_RS00345	0.82	-1.6
87,022	-		BPHYT_RS00345	0.89	+0.1
87,025	+		BPHYT_RS00345	0.89	-0.5
87,032	+		BPHYT_RS00345	0.90	-0.0
87,033	-		BPHYT_RS00345	0.90	-0.4
87,118	+				-1.0
87,119	-				+1.5
87,210	-				+0.6
87,484	+				-0.5
87,485	-				-1.1
87,549	+		BPHYT_RS00350	0.12	-0.3
87,738	-		BPHYT_RS00350	0.39	-0.3
87,910	-		BPHYT_RS00350	0.64	+1.8
88,010	+		BPHYT_RS00350	0.79	+1.3
88,204	+				-0.6
88,255	+				+0.3
88,730	+				+0.7
88,734	+				-0.5
88,746	+				-0.4
88,746	+				+0.5
88,747	-				+0.2
88,973	-				+0.1
89,116	+				+0.2