Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34660

Experiment: 36hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO11 MOI 1
3,382,236	+		BPHYT_RS34655	0.32	-0.7
3,382,780	+		BPHYT_RS34655	0.78	-0.2
3,382,983	+				+0.4
3,383,035	-				+0.0
3,383,122	-				+1.5
3,383,122	-				+0.2
3,383,124	-				-0.5
3,383,124	-				+0.4
3,383,558	-		BPHYT_RS34660	0.56	-1.1
3,383,558	-				+2.5
3,383,642	+		BPHYT_RS34660	0.70	-1.0
3,383,642	+		BPHYT_RS34660	0.70	-1.0
3,383,643	-		BPHYT_RS34660	0.70	-2.2
3,383,646	+		BPHYT_RS34660	0.70	+0.3
3,383,646	+		BPHYT_RS34660	0.70	-0.6
3,383,647	-		BPHYT_RS34660	0.70	-0.7
3,383,755	+		BPHYT_RS34660	0.87	-0.4
3,383,816	+				+0.9
3,383,904	-				-1.2
3,383,906	-				-0.7
3,383,992	+		BPHYT_RS34665	0.13	-0.3
3,384,046	+		BPHYT_RS34665	0.27	+2.0
3,384,046	+		BPHYT_RS34665	0.27	+0.1
3,384,047	-		BPHYT_RS34665	0.27	+0.1
3,384,070	-		BPHYT_RS34665	0.33	+1.9
3,384,368	-				-0.2
3,384,382	+				+1.1
3,384,553	-		BPHYT_RS34670	0.14	+0.0
3,384,685	+		BPHYT_RS34670	0.26	+1.5