Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34420

Experiment: 36hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO11 MOI 1
3,328,141	-		BPHYT_RS34415	0.13	+1.1
3,328,229	-		BPHYT_RS34415	0.23	-1.1
3,328,267	+		BPHYT_RS34415	0.27	-0.3
3,328,286	-		BPHYT_RS34415	0.30	-0.5
3,328,373	+		BPHYT_RS34415	0.39	+0.0
3,328,678	+		BPHYT_RS34415	0.73	-0.1
3,328,679	-		BPHYT_RS34415	0.73	-0.8
3,328,903	+				+0.9
3,328,903	+				+0.1
3,329,035	-				-1.9
3,329,064	-				-0.2
3,329,285	+		BPHYT_RS34420	0.23	+2.0
3,329,285	+		BPHYT_RS34420	0.23	-0.2
3,329,333	+		BPHYT_RS34420	0.28	-0.3
3,329,420	+		BPHYT_RS34420	0.37	-2.0
3,329,533	-		BPHYT_RS34420	0.50	-0.5
3,329,533	-		BPHYT_RS34420	0.50	-1.1
3,329,702	+		BPHYT_RS34420	0.68	-1.2
3,329,702	+		BPHYT_RS34420	0.68	-1.2
3,330,039	-				+0.1
3,330,039	-				+0.5
3,330,268	+				-0.2
3,330,480	-		BPHYT_RS34425	0.15	+1.1
3,330,678	+		BPHYT_RS34425	0.21	-0.6