Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34215

Experiment: 36hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO11 MOI 1
3,277,791	+				-0.4
3,277,792	-				-0.9
3,278,265	+		BPHYT_RS34210	0.47	-0.4
3,278,277	+		BPHYT_RS34210	0.49	+1.0
3,278,278	-		BPHYT_RS34210	0.49	+0.2
3,278,278	-		BPHYT_RS34210	0.49	-1.2
3,278,278	-		BPHYT_RS34210	0.49	-1.3
3,278,302	+		BPHYT_RS34210	0.51	-1.0
3,278,304	+		BPHYT_RS34210	0.52	+0.2
3,278,304	+		BPHYT_RS34210	0.52	-2.0
3,278,305	-		BPHYT_RS34210	0.52	+2.2
3,278,476	-		BPHYT_RS34210	0.72	-0.3
3,278,850	+				-2.2
3,278,851	-				+0.3
3,278,851	-				-0.2
3,278,851	-				-0.4
3,279,016	+		BPHYT_RS34215	0.32	-0.6
3,279,024	-		BPHYT_RS34215	0.33	-1.3
3,279,142	+		BPHYT_RS34215	0.49	-0.4
3,279,143	-		BPHYT_RS34215	0.49	+0.1
3,279,143	-		BPHYT_RS34215	0.49	+0.1
3,279,143	-		BPHYT_RS34215	0.49	-1.2
3,279,204	+		BPHYT_RS34215	0.57	+0.8
3,279,204	+		BPHYT_RS34215	0.57	-1.8
3,279,205	-		BPHYT_RS34215	0.57	-0.7
3,279,525	+				+1.2
3,279,525	+				-0.2
3,279,526	-				+0.6
3,279,526	-				+0.7
3,279,671	+		BPHYT_RS34220	0.12	-0.1
3,279,672	-		BPHYT_RS34220	0.13	-0.1
3,279,756	-		BPHYT_RS34220	0.23	+0.2
3,279,980	+		BPHYT_RS34220	0.50	-0.1
3,280,350	-				+0.4
3,280,350	-				-0.0
3,280,392	+				+0.9