Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31705

Experiment: 36hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO11 MOI 1
2,669,059	+		BPHYT_RS31700	0.51	-0.4
2,669,155	-		BPHYT_RS31700	0.60	-0.8
2,669,243	-		BPHYT_RS31700	0.68	-2.5
2,669,732	+				+2.4
2,669,762	+		BPHYT_RS31705	0.11	+0.3
2,670,199	+		BPHYT_RS31705	0.44	-0.4
2,670,199	+		BPHYT_RS31705	0.44	-0.6
2,670,393	+		BPHYT_RS31705	0.59	+0.7
2,670,650	+		BPHYT_RS31705	0.78	-0.1
2,670,650	+		BPHYT_RS31705	0.78	-0.6
2,670,781	+		BPHYT_RS31705	0.88	+0.4
2,671,016	-				+0.2
2,671,133	-				+0.9
2,671,225	-		BPHYT_RS31710	0.15	-1.0
2,671,297	+		BPHYT_RS31710	0.21	+1.0
2,671,320	+		BPHYT_RS31710	0.23	-0.2
2,671,320	+		BPHYT_RS31710	0.23	-0.7
2,671,402	+		BPHYT_RS31710	0.30	-0.9
2,671,451	-		BPHYT_RS31710	0.34	+0.8
2,671,514	+		BPHYT_RS31710	0.40	-1.5
2,671,628	-		BPHYT_RS31710	0.50	-0.3
2,671,688	-		BPHYT_RS31710	0.55	+0.5
2,671,689	+		BPHYT_RS31710	0.55	-1.0
2,671,693	+		BPHYT_RS31710	0.55	+0.1