Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31025
Experiment: 36hr PHYTO11 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 36hr PHYTO11 MOI 1 |
---|---|---|---|---|---|
remove | |||||
2,514,048 | - | -0.5 | |||
2,514,237 | - | BPHYT_RS31020 | 0.43 | -1.0 | |
2,515,298 | - | BPHYT_RS31025 | 0.87 | +1.7 | |
2,515,298 | - | BPHYT_RS31025 | 0.87 | -0.9 | |
2,515,571 | - | +0.8 | |||
2,516,262 | + | BPHYT_RS31030 | 0.33 | +0.9 | |
2,516,263 | - | BPHYT_RS31030 | 0.33 | -0.6 |
Or see this region's nucleotide sequence