Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS30435

Experiment: 36hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO11 MOI 1
2,385,498	+				+0.9
2,385,541	+				-0.1
2,385,838	+		BPHYT_RS30430	0.28	-0.2
2,385,934	+		BPHYT_RS30430	0.39	-0.7
2,386,605	+		BPHYT_RS30435	0.16	-1.4
2,386,650	+		BPHYT_RS30435	0.21	-0.6
2,386,735	-		BPHYT_RS30435	0.29	-1.9
2,386,735	-		BPHYT_RS30435	0.29	-0.6
2,386,735	-		BPHYT_RS30435	0.29	-0.3
2,386,735	-		BPHYT_RS30435	0.29	+0.1
2,387,255	+		BPHYT_RS30435	0.81	-0.4
2,387,502	+				+0.0
2,387,502	+				-0.1
2,387,713	+		BPHYT_RS30440	0.24	+0.0
2,387,713	+		BPHYT_RS30440	0.24	+0.3
2,387,714	-		BPHYT_RS30440	0.24	+0.3
2,388,242	-				-0.5
2,388,371	+				-0.9