Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS26790

Experiment: 36hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO11 MOI 1
1,581,794	-				-0.6
1,581,794	-				+0.4
1,582,007	+				+2.1
1,582,007	+				-0.5
1,582,080	+				-0.6
1,582,086	+				+0.6
1,582,087	-				-1.6
1,582,087	-				+0.9
1,582,088	+				+1.2
1,582,229	-				+2.4
1,582,247	-				+2.4
1,582,247	-				+1.7
1,582,247	-				+2.4
1,582,435	+				-0.1
1,582,435	+				-0.6
1,583,027	-		BPHYT_RS26790	0.23	+1.9
1,583,208	-		BPHYT_RS26790	0.31	-0.1
1,583,252	+		BPHYT_RS26790	0.33	+0.1
1,583,252	+		BPHYT_RS26790	0.33	-2.9
1,583,252	+		BPHYT_RS26790	0.33	-0.5
1,583,252	+		BPHYT_RS26790	0.33	-0.1
1,583,253	-		BPHYT_RS26790	0.33	-1.6
1,583,253	-		BPHYT_RS26790	0.33	+1.1
1,583,305	+		BPHYT_RS26790	0.36	-0.1
1,583,305	+		BPHYT_RS26790	0.36	-0.6
1,583,409	-		BPHYT_RS26790	0.40	-0.4
1,583,409	-		BPHYT_RS26790	0.40	+0.0
1,583,745	+		BPHYT_RS26790	0.56	+1.6
1,583,745	+		BPHYT_RS26790	0.56	+0.4
1,584,033	+		BPHYT_RS26790	0.70	-0.1
1,584,200	+		BPHYT_RS26790	0.78	-0.2
1,584,300	-		BPHYT_RS26790	0.82	-0.3
1,584,348	-		BPHYT_RS26790	0.84	-0.8
1,584,757	-				+0.5
1,584,758	+				-0.6
1,584,799	-				+0.6
1,584,947	-				+0.8
1,585,120	+		BPHYT_RS26795	0.26	-0.6
1,585,120	+		BPHYT_RS26795	0.26	-1.5
1,585,120	+		BPHYT_RS26795	0.26	+0.4
1,585,120	+		BPHYT_RS26795	0.26	-1.0
1,585,121	-		BPHYT_RS26795	0.26	-0.6
1,585,121	-		BPHYT_RS26795	0.26	-0.8
1,585,121	-		BPHYT_RS26795	0.26	-0.3
1,585,128	+		BPHYT_RS26795	0.27	-1.0
1,585,201	+		BPHYT_RS26795	0.35	+0.6
1,585,297	-		BPHYT_RS26795	0.46	+0.6
1,585,297	-		BPHYT_RS26795	0.46	-1.5
1,585,334	-		BPHYT_RS26795	0.50	+0.3
1,585,534	-		BPHYT_RS26795	0.72	-1.8