Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS19485

Experiment: 36hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO11 MOI 1
4,383,907	+		BPHYT_RS19480	0.27	+1.2
4,383,908	-		BPHYT_RS19480	0.27	-0.4
4,383,949	+		BPHYT_RS19480	0.30	-0.1
4,384,261	+		BPHYT_RS19480	0.56	-2.6
4,384,261	+		BPHYT_RS19480	0.56	-0.2
4,384,279	+		BPHYT_RS19480	0.57	-1.4
4,384,280	-		BPHYT_RS19480	0.57	+0.4
4,384,280	-		BPHYT_RS19480	0.57	-0.2
4,384,345	+		BPHYT_RS19480	0.63	-0.7
4,384,345	+		BPHYT_RS19480	0.63	-0.3
4,384,346	-		BPHYT_RS19480	0.63	-0.8
4,384,346	-		BPHYT_RS19480	0.63	+0.5
4,384,351	+		BPHYT_RS19480	0.63	-1.5
4,384,417	+		BPHYT_RS19480	0.69	-0.8
4,384,417	+		BPHYT_RS19480	0.69	-1.0
4,384,417	+		BPHYT_RS19480	0.69	+0.5
4,384,564	+		BPHYT_RS19480	0.81	+0.2
4,384,565	-		BPHYT_RS19480	0.81	-1.2
4,384,565	-		BPHYT_RS19480	0.81	+0.5
4,384,565	-		BPHYT_RS19480	0.81	-0.3
4,384,660	+		BPHYT_RS19480	0.89	+0.4
4,384,660	+		BPHYT_RS19480	0.89	-0.1
4,384,661	-		BPHYT_RS19480	0.89	-0.2
4,384,661	-		BPHYT_RS19480	0.89	+0.0
4,384,851	+				+1.1
4,384,852	-				+0.1
4,384,860	+				+0.9
4,384,860	+				+1.3
4,384,860	+				+2.5
4,384,861	-				-1.1
4,384,939	+		BPHYT_RS19485	0.12	+0.6
4,384,940	-		BPHYT_RS19485	0.12	-1.5
4,384,998	-		BPHYT_RS19485	0.20	-0.9
4,385,071	-		BPHYT_RS19485	0.29	+1.2
4,385,200	+		BPHYT_RS19485	0.46	-0.6
4,385,288	+		BPHYT_RS19485	0.58	-0.6
4,385,308	+		BPHYT_RS19485	0.61	-0.7
4,385,501	+		BPHYT_RS19485	0.86	-0.7
4,385,502	-		BPHYT_RS19485	0.86	-0.4
4,385,502	-		BPHYT_RS19485	0.86	-0.3
4,385,571	+				+0.2
4,385,601	-				-0.6
4,385,644	+				+0.6
4,385,645	-				+0.1
4,385,646	+				+0.4
4,385,646	+				+1.3
4,385,646	+				-0.3
4,385,646	+				+0.1
4,385,646	+				-0.5
4,385,646	+				+0.5
4,385,647	-				-0.8
4,385,647	-				-0.6
4,385,686	-		BPHYT_RS19490	0.11	-0.7
4,385,725	+		BPHYT_RS19490	0.16	-1.2
4,386,394	+				+0.7
4,386,401	+				-0.1
4,386,448	+				-0.3
4,386,481	+				+0.3
4,386,502	-				+1.6
4,386,576	+				-0.7
4,386,576	+				+0.1
4,386,576	+				+0.4
4,386,581	+				+0.9
4,386,581	+				+0.0
4,386,582	-				+0.3