Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS17440

Experiment: 36hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO11 MOI 1
3,950,861	-				+0.8
3,950,862	+				-2.4
3,951,108	+		BPHYT_RS17440	0.42	-0.5
3,951,108	+		BPHYT_RS17440	0.42	+0.1
3,951,108	+		BPHYT_RS17440	0.42	+0.8
3,951,180	-		BPHYT_RS17440	0.62	-0.6
3,951,308	+				-2.2
3,951,309	-				-1.2
3,951,309	-				-0.8
3,951,364	+				+0.3
3,951,365	-				+0.6
3,951,386	+				+0.6
3,951,387	-				+1.0
3,951,614	-				+3.0
3,951,915	-		BPHYT_RS17445	0.25	-0.2
3,952,015	+		BPHYT_RS17445	0.35	+0.0
3,952,015	+		BPHYT_RS17445	0.35	+0.1
3,952,249	-		BPHYT_RS17445	0.56	+0.8