Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS14840

Experiment: 36hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO11 MOI 1
3,375,163	+		BPHYT_RS14835	0.55	+1.0
3,375,163	+		BPHYT_RS14835	0.55	+0.1
3,375,164	-		BPHYT_RS14835	0.55	+1.4
3,375,244	-		BPHYT_RS14835	0.64	+1.4
3,375,379	+		BPHYT_RS14835	0.78	+0.3
3,375,381	+		BPHYT_RS14835	0.78	-0.3
3,375,381	+		BPHYT_RS14835	0.78	-0.4
3,375,565	-				-0.9
3,375,673	+				-1.5
3,375,673	+				-0.8
3,375,674	-				+2.1
3,375,792	+				-0.2
3,375,793	-				-1.5
3,375,793	-				-0.8
3,376,105	+		BPHYT_RS14840	0.20	-1.6
3,376,106	-		BPHYT_RS14840	0.20	-1.8
3,376,172	-		BPHYT_RS14840	0.26	-1.0
3,376,256	-		BPHYT_RS14840	0.33	-2.4
3,376,316	-		BPHYT_RS14840	0.38	-0.8
3,376,316	-		BPHYT_RS14840	0.38	-1.1
3,376,436	-		BPHYT_RS14840	0.49	+0.2
3,376,436	-		BPHYT_RS14840	0.49	-0.3
3,376,436	-		BPHYT_RS14840	0.49	+2.4
3,376,436	-		BPHYT_RS14840	0.49	-1.2
3,376,540	+		BPHYT_RS14840	0.58	-0.7
3,376,541	-		BPHYT_RS14840	0.58	-1.1
3,376,552	+		BPHYT_RS14840	0.59	-2.4
3,376,618	+		BPHYT_RS14840	0.65	-0.1
3,376,879	+		BPHYT_RS14840	0.87	+0.8
3,376,913	-				-0.8
3,376,927	+				-1.0
3,376,928	-				-1.2
3,376,928	-				-2.9
3,376,934	+				+0.8
3,376,934	+				-1.3
3,377,116	+				+1.1
3,377,460	-		BPHYT_RS14845	0.37	+2.4
3,377,652	-		BPHYT_RS14845	0.58	+0.8
3,377,652	-		BPHYT_RS14845	0.58	+1.4
3,377,652	-		BPHYT_RS14845	0.58	+2.4
3,377,759	+		BPHYT_RS14845	0.70	+2.4
3,377,983	+				+2.4
3,377,983	+				+2.4