Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS10945

Experiment: 36hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO11 MOI 1
2,490,082	+		BPHYT_RS10940	0.14	-0.2
2,490,082	+		BPHYT_RS10940	0.14	-1.6
2,490,083	-		BPHYT_RS10940	0.14	+0.4
2,490,083	-		BPHYT_RS10940	0.14	-2.0
2,490,083	-		BPHYT_RS10940	0.14	-2.2
2,490,091	-		BPHYT_RS10940	0.15	+0.0
2,490,581	-		BPHYT_RS10940	0.73	+0.7
2,490,586	+		BPHYT_RS10940	0.74	-0.8
2,490,725	-				+1.4
2,490,735	-				-0.9
2,491,325	+		BPHYT_RS10945	0.62	-0.5
2,491,422	-		BPHYT_RS10945	0.75	-0.6
2,491,579	+				-1.1
2,491,580	-				-0.9
2,491,580	-				-0.2
2,491,683	+				-0.0
2,492,150	+		BPHYT_RS10950	0.47	-0.4
2,492,151	-		BPHYT_RS10950	0.47	+1.0
2,492,221	+		BPHYT_RS10950	0.55	-0.8
2,492,222	-		BPHYT_RS10950	0.55	-1.4