Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09965

Experiment: 36hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO11 MOI 1
2,268,650	+		BPHYT_RS09960	0.40	+0.2
2,268,650	+		BPHYT_RS09960	0.40	+0.6
2,268,706	-		BPHYT_RS09960	0.47	-1.0
2,268,706	-		BPHYT_RS09960	0.47	-0.1
2,268,708	+		BPHYT_RS09960	0.47	-1.2
2,269,516	+		BPHYT_RS09965	0.16	+0.1
2,269,517	-		BPHYT_RS09965	0.16	-0.9
2,269,580	-		BPHYT_RS09965	0.23	+0.4
2,269,586	-		BPHYT_RS09965	0.23	+0.1
2,269,600	+		BPHYT_RS09965	0.25	-0.6
2,269,601	-		BPHYT_RS09965	0.25	-0.9
2,269,675	+		BPHYT_RS09965	0.33	-1.9
2,270,074	-		BPHYT_RS09965	0.75	-0.5
2,270,089	+		BPHYT_RS09965	0.76	-2.1
2,270,601	+		BPHYT_RS09970	0.34	-0.1
2,270,602	-		BPHYT_RS09970	0.34	+0.9
2,270,716	-		BPHYT_RS09970	0.53	-1.4
2,270,802	-		BPHYT_RS09970	0.66	-0.2
2,270,949	+				-0.8
2,270,950	-				-2.3