Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS06150

Experiment: 36hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO11 MOI 1
1,398,653	+		BPHYT_RS06145	0.55	-0.2
1,398,654	-		BPHYT_RS06145	0.55	-1.6
1,398,707	-		BPHYT_RS06145	0.58	+1.0
1,398,707	-		BPHYT_RS06145	0.58	-0.2
1,398,849	-		BPHYT_RS06145	0.67	-1.0
1,398,849	-		BPHYT_RS06145	0.67	+0.8
1,398,896	+		BPHYT_RS06145	0.70	-1.0
1,398,897	-		BPHYT_RS06145	0.70	-0.1
1,399,217	+		BPHYT_RS06145	0.89	-0.4
1,399,217	+		BPHYT_RS06145	0.89	-1.2
1,399,230	-				-0.4
1,399,335	-				-0.2
1,399,434	+				-0.5
1,399,434	+				+0.1
1,399,440	+				+0.2
1,399,441	-				+1.1
1,399,443	+				-0.2
1,399,443	+				+4.3
1,399,444	-				+0.2
1,399,444	-				+0.1
1,399,444	-				-0.4
1,399,740	-		BPHYT_RS06150	0.22	+1.4
1,400,220	+		BPHYT_RS06150	0.56	-0.4
1,400,220	+		BPHYT_RS06150	0.56	+1.9
1,400,221	-		BPHYT_RS06150	0.56	-1.4
1,400,221	-		BPHYT_RS06150	0.56	-0.7
1,400,253	+		BPHYT_RS06150	0.58	+2.4
1,400,254	-		BPHYT_RS06150	0.58	+2.8
1,400,311	-		BPHYT_RS06150	0.62	-0.1
1,400,755	-				+0.1
1,400,755	-				-0.4
1,400,974	+				-0.6
1,400,975	-				+0.7
1,401,021	+				-0.4
1,401,022	-				-0.6
1,401,095	-				-0.2
1,401,295	+				+0.0
1,401,296	-				-1.1
1,401,532	+		BPHYT_RS06155	0.22	+0.6
1,401,841	+		BPHYT_RS06155	0.43	+1.1