Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS05405

Experiment: 36hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO11 MOI 1
1,240,517	-		BPHYT_RS05395	0.41	-0.3
1,241,499	-				+0.0
1,241,670	-		BPHYT_RS05405	0.43	-0.5
1,241,866	+		BPHYT_RS05405	0.82	-0.8
1,241,872	-		BPHYT_RS05405	0.83	-1.3
1,241,994	+				-2.7
1,241,995	-				+0.2
1,241,997	-				+0.9
1,242,067	+				+0.4
1,242,069	+				+0.2
1,242,161	-				+0.3
1,242,632	-		BPHYT_RS05410	0.53	-1.8
1,242,644	+		BPHYT_RS05410	0.54	+1.1
1,242,690	+		BPHYT_RS05410	0.59	-1.4
1,242,691	-		BPHYT_RS05410	0.59	+0.0
1,242,791	+		BPHYT_RS05410	0.69	+1.1
1,242,929	-		BPHYT_RS05410	0.82	-0.1