Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS05145

Experiment: 36hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO11 MOI 1
1,186,099	-		BPHYT_RS05140	0.58	-1.3
1,186,103	+		BPHYT_RS05140	0.58	-0.7
1,186,183	-		BPHYT_RS05140	0.64	-0.5
1,186,350	-		BPHYT_RS05140	0.77	-0.1
1,186,451	-		BPHYT_RS05140	0.85	-2.7
1,186,453	-		BPHYT_RS05140	0.85	-0.2
1,186,879	+		BPHYT_RS05145	0.10	-0.1
1,186,879	+		BPHYT_RS05145	0.10	-0.5
1,186,879	+		BPHYT_RS05145	0.10	+0.0
1,186,880	-		BPHYT_RS05145	0.10	+1.1
1,187,050	+		BPHYT_RS05145	0.28	-1.9
1,187,154	-		BPHYT_RS05145	0.38	-0.7
1,187,156	-		BPHYT_RS05145	0.38	+1.5
1,187,185	+		BPHYT_RS05145	0.41	+0.9
1,187,185	+		BPHYT_RS05145	0.41	+0.4
1,187,507	-		BPHYT_RS05145	0.74	-0.2
1,187,511	-		BPHYT_RS05145	0.75	+0.4
1,187,530	+		BPHYT_RS05145	0.77	+0.1
1,188,169	+				+0.9
1,188,169	+				+0.0
1,188,170	-				-1.0
1,188,173	+				-0.9
1,188,174	-				+0.2
1,188,303	-		BPHYT_RS05150	0.18	-0.3
1,188,304	+		BPHYT_RS05150	0.18	-0.5
1,188,304	+		BPHYT_RS05150	0.18	-1.3
1,188,304	+		BPHYT_RS05150	0.18	+0.7
1,188,305	-		BPHYT_RS05150	0.18	+0.1
1,188,305	-		BPHYT_RS05150	0.18	+0.2
1,188,305	-		BPHYT_RS05150	0.18	-1.0
1,188,497	+		BPHYT_RS05150	0.43	-0.9
1,188,498	-		BPHYT_RS05150	0.43	-0.5
1,188,548	+		BPHYT_RS05150	0.49	-1.9
1,188,549	-		BPHYT_RS05150	0.49	+0.0
1,188,549	-		BPHYT_RS05150	0.49	-0.1
1,188,549	-		BPHYT_RS05150	0.49	+0.5
1,188,549	-				+0.5
1,188,690	-		BPHYT_RS05150	0.67	-0.9
1,188,716	+		BPHYT_RS05150	0.71	-1.5