Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS05065

Experiment: 36hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO11 MOI 1
1,166,314	+				-1.1
1,166,398	+				+0.0
1,166,520	-				-0.3
1,166,520	-				-0.3
1,166,603	+		BPHYT_RS05060	0.13	-1.5
1,166,603	+		BPHYT_RS05060	0.13	-0.8
1,166,639	+		BPHYT_RS05060	0.19	+0.9
1,166,640	-		BPHYT_RS05060	0.19	-0.8
1,166,640	-		BPHYT_RS05060	0.19	+2.7
1,166,640	-		BPHYT_RS05060	0.19	-0.2
1,166,640	-		BPHYT_RS05060	0.19	-0.7
1,166,640	-		BPHYT_RS05060	0.19	-0.8
1,166,815	+		BPHYT_RS05060	0.47	-0.4
1,166,815	+		BPHYT_RS05060	0.47	-0.1
1,166,815	+		BPHYT_RS05060	0.47	+1.0
1,166,816	-		BPHYT_RS05060	0.47	+0.0
1,166,816	-		BPHYT_RS05060	0.47	-0.4
1,166,816	-		BPHYT_RS05060	0.47	-1.2
1,166,937	-		BPHYT_RS05060	0.67	-3.1
1,166,958	-		BPHYT_RS05060	0.70	+0.5
1,167,299	+		BPHYT_RS05065	0.19	-1.1
1,167,300	-		BPHYT_RS05065	0.19	-0.5
1,167,734	+		BPHYT_RS05065	0.76	-0.6
1,167,943	-				-0.9