Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS35035

Experiment: 36hr PHYTO9 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO9 MOI 1
3,462,057	+		BPHYT_RS35025	0.59	-0.8
3,462,270	-		BPHYT_RS35025	0.78	-2.3
3,462,310	-		BPHYT_RS35025	0.82	-0.3
3,462,356	+		BPHYT_RS35025	0.86	+0.5
3,462,687	+		BPHYT_RS35030	0.19	+0.1
3,462,716	-		BPHYT_RS35030	0.33	+0.2
3,462,716	-		BPHYT_RS35030	0.33	+0.7
3,462,763	+		BPHYT_RS35030	0.56	-0.6
3,462,764	-		BPHYT_RS35030	0.57	+0.6
3,462,820	-		BPHYT_RS35030	0.84	+0.2
3,462,828	+		BPHYT_RS35030	0.88	-0.3
3,462,829	-		BPHYT_RS35030	0.89	+0.7
3,462,851	+				+0.4
3,462,852	-				+0.0
3,462,852	-				+0.0
3,462,890	-				+0.9
3,463,341	+		BPHYT_RS35035	0.29	-0.8
3,463,341	+		BPHYT_RS35035	0.29	-0.3
3,463,352	-		BPHYT_RS35035	0.31	-0.8
3,463,518	-		BPHYT_RS35035	0.46	-0.1
3,463,518	-		BPHYT_RS35035	0.46	-1.0
3,464,128	-				-0.3
3,464,153	+				+0.0
3,464,382	-				-0.2
3,464,384	+				-0.1
3,464,384	+				-1.5
3,464,384	+				+0.4
3,464,385	-				+1.3
3,464,385	-				-0.3
3,464,436	-				-0.2
3,464,574	-		BPHYT_RS35040	0.22	+0.7
3,464,574	-		BPHYT_RS35040	0.22	+2.5
3,464,685	-		BPHYT_RS35040	0.41	+1.0
3,464,687	+		BPHYT_RS35040	0.41	-0.1
3,464,727	-		BPHYT_RS35040	0.48	+0.6
3,464,820	-		BPHYT_RS35040	0.63	+0.1
3,465,077	-				+1.0
3,465,077	-				-0.2