Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33320

Experiment: 36hr PHYTO9 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO9 MOI 1
3,056,730	+				-0.6
3,056,731	-				-0.6
3,056,773	+				-0.2
3,056,774	-				-1.2
3,056,818	+				+0.1
3,056,818	+				-0.4
3,056,840	+		BPHYT_RS33315	0.12	-1.1
3,056,873	+		BPHYT_RS33315	0.16	-1.5
3,056,895	-		BPHYT_RS33315	0.19	-0.1
3,056,982	+		BPHYT_RS33315	0.32	-0.4
3,056,994	-		BPHYT_RS33315	0.33	-0.5
3,057,051	-		BPHYT_RS33315	0.41	-0.8
3,057,456	-				+0.0
3,057,631	-				+0.8
3,057,669	-				-1.1
3,057,777	+				-1.4
3,057,778	-				-0.0
3,057,804	+		BPHYT_RS33320	0.12	-0.3
3,057,804	+		BPHYT_RS33320	0.12	+1.1
3,057,928	+		BPHYT_RS33320	0.24	+0.3
3,057,931	-		BPHYT_RS33320	0.25	+0.7
3,058,264	-		BPHYT_RS33320	0.57	-0.0
3,058,352	-		BPHYT_RS33320	0.66	+1.5
3,058,352	-		BPHYT_RS33320	0.66	+0.2
3,058,391	-		BPHYT_RS33320	0.70	+0.6
3,058,416	+		BPHYT_RS33320	0.72	-1.3
3,058,417	-		BPHYT_RS33320	0.72	-0.2
3,058,440	+		BPHYT_RS33320	0.74	+1.4
3,058,443	+		BPHYT_RS33320	0.75	-0.2
3,058,444	-		BPHYT_RS33320	0.75	-0.2
3,058,524	+		BPHYT_RS33320	0.83	+0.4
3,058,679	+				-0.2
3,058,741	+				-0.8
3,058,793	-				-1.0
3,058,946	-				-0.4
3,059,003	-				+0.9
3,059,006	-				-0.1
3,059,237	+				+0.9
3,059,400	-				+1.5
3,059,639	-				-0.4
3,059,639	-				-1.5
3,059,639	-				-0.2