Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS32890

Experiment: 36hr PHYTO9 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO9 MOI 1
2,958,256	+		BPHYT_RS32885	0.71	+1.2
2,958,598	-				+1.7
2,958,598	-				+0.5
2,958,780	+				+0.3
2,958,780	+				-0.6
2,958,780	+				-0.1
2,958,823	+				+0.1
2,958,884	-				+0.1
2,958,952	-				-1.7
2,959,003	+				-0.6
2,959,004	-				+0.1
2,959,042	+				-1.1
2,959,042	+				+1.0
2,959,924	-				-1.7
2,960,358	-		BPHYT_RS32895	0.21	-1.1
2,960,358	-		BPHYT_RS32895	0.21	+0.1
2,960,484	+		BPHYT_RS32895	0.30	-1.3
2,960,708	+		BPHYT_RS32895	0.46	-1.4
2,960,709	-		BPHYT_RS32895	0.46	-0.1
2,960,712	+		BPHYT_RS32895	0.46	-1.3
2,960,713	-		BPHYT_RS32895	0.46	-0.9
2,960,713	-		BPHYT_RS32895	0.46	-0.7
2,960,805	-		BPHYT_RS32895	0.53	+1.4