Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31955

Experiment: 36hr PHYTO9 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO9 MOI 1
2,728,139	-		BPHYT_RS31950	0.65	+0.3
2,728,383	-				+0.0
2,728,709	-				-0.7
2,728,742	-				+0.7
2,728,758	-				-0.2
2,728,810	-				+0.1
2,729,020	-				+0.0
2,729,020	-				-1.0
2,729,165	-		BPHYT_RS31955	0.17	-0.5
2,729,165	-		BPHYT_RS31955	0.17	-0.2
2,729,174	-		BPHYT_RS31955	0.18	-0.9
2,729,243	-		BPHYT_RS31955	0.25	-0.9
2,729,255	-		BPHYT_RS31955	0.27	-0.1
2,729,298	-		BPHYT_RS31955	0.31	-0.5
2,729,414	+		BPHYT_RS31955	0.44	-1.5
2,729,415	-		BPHYT_RS31955	0.44	-0.1
2,729,441	+		BPHYT_RS31955	0.47	-1.9
2,729,442	-		BPHYT_RS31955	0.47	+0.8
2,729,442	-		BPHYT_RS31955	0.47	+0.5
2,729,442	-		BPHYT_RS31955	0.47	-2.2
2,729,455	-		BPHYT_RS31955	0.49	-0.7
2,729,455	-		BPHYT_RS31955	0.49	+0.8
2,729,510	-		BPHYT_RS31955	0.55	-1.1
2,729,735	+		BPHYT_RS31955	0.80	-1.1
2,729,827	-				-0.0
2,730,222	+		BPHYT_RS31960	0.10	+0.0
2,730,667	+		BPHYT_RS31960	0.57	+2.5
2,730,758	+		BPHYT_RS31960	0.67	+1.1
2,730,759	-		BPHYT_RS31960	0.67	+0.1