Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS28940

Experiment: 36hr PHYTO9 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO9 MOI 1
2,041,864	-		BPHYT_RS28935	0.60	-0.7
2,041,969	-		BPHYT_RS28935	0.65	-0.2
2,042,058	+		BPHYT_RS28935	0.69	+0.1
2,042,058	+		BPHYT_RS28935	0.69	+0.7
2,042,086	-		BPHYT_RS28935	0.71	-1.5
2,042,138	+		BPHYT_RS28935	0.73	-0.2
2,042,202	-		BPHYT_RS28935	0.76	-0.4
2,042,205	+		BPHYT_RS28935	0.76	-0.9
2,042,206	-		BPHYT_RS28935	0.76	+0.1
2,042,523	+				-0.7
2,042,667	+				-0.6
2,042,739	-				-0.7
2,043,327	+		BPHYT_RS28940	0.23	+1.2
2,043,328	-		BPHYT_RS28940	0.23	-0.3
2,043,329	+		BPHYT_RS28940	0.23	+0.0
2,043,329	+		BPHYT_RS28940	0.23	+0.2
2,043,329	+		BPHYT_RS28940	0.23	-0.1
2,043,334	-		BPHYT_RS28940	0.23	+0.6
2,043,334	-		BPHYT_RS28940	0.23	-0.4
2,043,511	-		BPHYT_RS28940	0.30	+1.3
2,044,051	-		BPHYT_RS28940	0.51	-0.0
2,044,444	-		BPHYT_RS28940	0.66	-0.2
2,044,444	-		BPHYT_RS28940	0.66	+0.1
2,044,446	+		BPHYT_RS28940	0.66	-1.1
2,044,548	+		BPHYT_RS28940	0.70	+0.5
2,044,549	-		BPHYT_RS28940	0.70	+0.4
2,045,164	-				-1.9
2,045,193	+				+0.5
2,045,193	+				-0.3
2,045,320	-				-1.0
2,045,323	-				-0.6
2,045,708	-		BPHYT_RS28945	0.32	-1.0
2,046,022	-		BPHYT_RS28945	0.58	-0.1
2,046,118	+		BPHYT_RS28945	0.66	-2.1