Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS27745

Experiment: 36hr PHYTO9 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO9 MOI 1
1,785,616	+		BPHYT_RS27735	0.68	+0.5
1,785,663	-		BPHYT_RS27735	0.72	+0.5
1,785,663	-		BPHYT_RS27735	0.72	+0.0
1,785,937	+				+0.2
1,785,938	-				-0.7
1,786,520	+				+0.3
1,786,520	+				+0.8
1,786,647	-		BPHYT_RS27745	0.13	+0.2
1,786,844	-		BPHYT_RS27745	0.43	+0.5
1,786,974	-		BPHYT_RS27745	0.62	+0.3
1,786,975	+		BPHYT_RS27745	0.62	+0.4
1,786,975	+		BPHYT_RS27745	0.62	-0.7
1,786,975	+		BPHYT_RS27745	0.62	-2.2
1,787,069	-		BPHYT_RS27745	0.76	-1.0
1,787,403	+				-0.8
1,787,403	+				+0.9
1,787,404	-				+0.1
1,787,798	-		BPHYT_RS27750	0.10	-1.2
1,787,936	-		BPHYT_RS27750	0.20	-0.3
1,788,039	+		BPHYT_RS27750	0.26	-0.4