Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS19820

Experiment: 36hr PHYTO9 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO9 MOI 1
4,459,395	+				-0.4
4,459,466	+				-0.5
4,459,467	-				+0.2
4,459,503	-				-0.9
4,459,609	-				-0.5
4,459,664	+				-0.0
4,459,712	-				-0.3
4,459,722	-				+0.0
4,459,722	-				+0.8
4,459,722	-				+0.5
4,459,980	+				-0.5
4,460,151	+				-0.1
4,460,175	-				-0.3
4,460,209	+				+1.7
4,460,210	-				-0.2
4,460,429	-		BPHYT_RS19820	0.50	-0.3
4,460,444	-		BPHYT_RS19820	0.55	-0.4
4,460,444	-		BPHYT_RS19820	0.55	-0.1
4,460,459	-		BPHYT_RS19820	0.60	-1.9
4,460,497	+		BPHYT_RS19820	0.71	-0.5
4,460,503	+		BPHYT_RS19820	0.73	+0.6
4,460,503	+		BPHYT_RS19820	0.73	+0.1
4,460,503	+		BPHYT_RS19820	0.73	-0.8
4,460,504	-		BPHYT_RS19820	0.73	+0.3
4,460,524	+		BPHYT_RS19820	0.80	-0.9
4,460,525	-		BPHYT_RS19820	0.80	-0.7
4,460,525	-		BPHYT_RS19820	0.80	-1.9
4,460,525	-		BPHYT_RS19820	0.80	-2.1
4,460,525	-		BPHYT_RS19820	0.80	-0.2
4,460,558	-				+1.6
4,460,588	-				+0.3
4,460,663	-				-1.1
4,460,705	+				-0.0
4,460,706	-				+1.3
4,460,775	+				-0.9
4,460,776	-				+0.1
4,460,812	+				+0.5
4,460,816	+				+0.0
4,460,817	-				-0.6
4,460,961	+				-0.1
4,460,973	-				+0.1
4,461,011	+				+0.4
4,461,097	+				-1.2
4,461,383	+		BPHYT_RS19825	0.25	-0.0