Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS19760

Experiment: 36hr PHYTO9 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO9 MOI 1
4,443,617	-				-1.9
4,444,043	+				+0.5
4,444,043	+				-0.8
4,444,044	-				+0.4
4,444,044	-				-0.5
4,444,044	-				-0.2
4,444,511	+				-0.7
4,444,589	-				-0.2
4,444,976	-		BPHYT_RS19760	0.41	-1.0
4,444,976	-		BPHYT_RS19760	0.41	+0.6
4,445,100	-		BPHYT_RS19760	0.54	-1.0
4,445,335	+		BPHYT_RS19760	0.79	-2.2
4,445,583	+				-0.6
4,445,583	+				-1.3
4,445,659	+				-0.5
4,445,776	+				-1.8
4,445,776	+				-1.0
4,445,776	+				+0.4
4,445,776	+				-0.1
4,445,777	-				-0.4
4,445,777	-				-1.8
4,446,175	+		BPHYT_RS19765	0.57	-0.2
4,446,175	+		BPHYT_RS19765	0.57	-0.5
4,446,175	+		BPHYT_RS19765	0.57	-0.3
4,446,175	+		BPHYT_RS19765	0.57	+0.1
4,446,176	-		BPHYT_RS19765	0.57	-0.3
4,446,176	-		BPHYT_RS19765	0.57	+0.3
4,446,176	-		BPHYT_RS19765	0.57	-0.1
4,446,176	-		BPHYT_RS19765	0.57	-1.2
4,446,176	-		BPHYT_RS19765	0.57	-0.6
4,446,194	-		BPHYT_RS19765	0.60	-0.7
4,446,396	-		BPHYT_RS19765	0.84	+0.3
4,446,477	+				-1.3
4,446,497	-				+0.8
4,446,520	+				-1.0