Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16725

Experiment: 36hr PHYTO9 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO9 MOI 1
3,785,456	+				-1.4
3,785,653	-		BPHYT_RS16720	0.21	-0.1
3,785,745	-		BPHYT_RS16720	0.40	-0.0
3,785,745	-		BPHYT_RS16720	0.40	+0.2
3,786,058	-				+0.2
3,786,058	-				+0.7
3,786,162	+				+0.4
3,786,162	+				-0.1
3,786,163	-				+0.1
3,786,163	-				-0.7
3,786,163	-				-0.9
3,786,733	+		BPHYT_RS16725	0.48	-0.5
3,786,734	-		BPHYT_RS16725	0.48	-1.1
3,786,734	-		BPHYT_RS16725	0.48	-0.4
3,786,734	-		BPHYT_RS16725	0.48	+0.2
3,786,741	-		BPHYT_RS16725	0.49	-0.4
3,786,741	-		BPHYT_RS16725	0.49	-0.3
3,786,741	-		BPHYT_RS16725	0.49	-1.2
3,786,834	+		BPHYT_RS16725	0.56	+1.7
3,786,835	-		BPHYT_RS16725	0.56	-0.2
3,786,835	-		BPHYT_RS16725	0.56	-1.0
3,786,904	-		BPHYT_RS16725	0.61	-0.3
3,787,264	+		BPHYT_RS16725	0.86	-1.1
3,787,365	+				-0.3
3,787,365	+				+0.2
3,787,374	+				-0.1
3,787,374	+				-1.0
3,787,375	-				+0.3
3,787,375	-				+0.7
3,787,375	-				-0.7
3,787,375	-				-1.0
3,787,375	-				-0.4
3,787,375	-				+0.0
3,787,375	-				-0.5
3,787,581	+				-0.1
3,787,582	-				-0.4
3,787,652	-				-0.1
3,787,714	+				+0.8
3,787,715	-				-1.2
3,787,715	-				-1.4
3,788,355	-				-0.5
3,788,355	-				+3.9
3,788,382	-				+0.1