Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS14700

Experiment: 36hr PHYTO9 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO9 MOI 1
3,348,410	-		BPHYT_RS14695	0.52	+0.4
3,348,820	+		BPHYT_RS14695	0.78	-0.4
3,348,820	+		BPHYT_RS14695	0.78	+0.4
3,348,826	+		BPHYT_RS14695	0.79	+1.0
3,348,827	-		BPHYT_RS14695	0.79	-0.4
3,348,827	-		BPHYT_RS14695	0.79	-1.1
3,349,051	-				-1.5
3,349,876	+				+0.4
3,349,876	+				+0.2
3,349,877	-				-1.6
3,349,910	-				-0.2
3,350,050	+				-1.0
3,350,050	+				-0.6
3,350,050	+				-0.3
3,350,254	+		BPHYT_RS14705	0.15	-0.9
3,350,255	-		BPHYT_RS14705	0.15	+2.2
3,350,255	-		BPHYT_RS14705	0.15	+1.0
3,350,255	-		BPHYT_RS14705	0.15	-1.6
3,350,255	-		BPHYT_RS14705	0.15	-0.3
3,350,255	-		BPHYT_RS14705	0.15	-0.5
3,350,435	-		BPHYT_RS14705	0.28	-0.5
3,350,461	-		BPHYT_RS14705	0.30	+1.6
3,350,605	+		BPHYT_RS14705	0.41	-0.5
3,350,794	+		BPHYT_RS14705	0.54	-0.1