Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS14695

Experiment: 36hr PHYTO9 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO9 MOI 1
3,346,699	+		BPHYT_RS14690	0.40	-0.3
3,346,699	+		BPHYT_RS14690	0.40	-0.2
3,346,699	+		BPHYT_RS14690	0.40	-1.5
3,346,700	-		BPHYT_RS14690	0.40	+0.5
3,346,700	-		BPHYT_RS14690	0.40	-0.2
3,346,703	-		BPHYT_RS14690	0.40	+0.8
3,346,703	-		BPHYT_RS14690	0.40	+1.2
3,346,861	+		BPHYT_RS14690	0.51	-1.0
3,346,862	-		BPHYT_RS14690	0.51	+1.0
3,346,862	-		BPHYT_RS14690	0.51	-0.4
3,346,862	-				+0.5
3,346,862	-		BPHYT_RS14690	0.51	+0.5
3,346,862	-		BPHYT_RS14690	0.51	-0.3
3,346,868	-		BPHYT_RS14690	0.51	-0.6
3,346,876	-		BPHYT_RS14690	0.52	+0.5
3,346,972	+		BPHYT_RS14690	0.59	-1.3
3,346,972	+		BPHYT_RS14690	0.59	+0.7
3,346,972	+		BPHYT_RS14690	0.59	-1.3
3,346,972	+		BPHYT_RS14690	0.59	-1.4
3,346,973	-		BPHYT_RS14690	0.59	+0.0
3,346,973	-		BPHYT_RS14690	0.59	-0.4
3,346,973	-		BPHYT_RS14690	0.59	-0.2
3,346,973	-		BPHYT_RS14690	0.59	-0.9
3,346,975	+		BPHYT_RS14690	0.59	-0.0
3,347,174	-		BPHYT_RS14690	0.73	-0.9
3,347,209	-		BPHYT_RS14690	0.75	-0.5
3,347,209	-		BPHYT_RS14690	0.75	-2.9
3,347,212	+		BPHYT_RS14690	0.75	+0.8
3,347,212	+		BPHYT_RS14690	0.75	-0.2
3,347,213	-		BPHYT_RS14690	0.75	-0.8
3,347,213	-		BPHYT_RS14690	0.75	-0.7
3,347,213	-		BPHYT_RS14690	0.75	-0.4
3,347,213	-		BPHYT_RS14690	0.75	+0.1
3,347,238	+		BPHYT_RS14690	0.77	+0.1
3,347,555	-				-1.8
3,347,797	+		BPHYT_RS14695	0.13	-0.1
3,347,798	-		BPHYT_RS14695	0.13	-1.1
3,348,061	+		BPHYT_RS14695	0.30	-0.8
3,348,062	-		BPHYT_RS14695	0.30	-0.9
3,348,062	-		BPHYT_RS14695	0.30	+0.5
3,348,109	+		BPHYT_RS14695	0.33	-0.8
3,348,410	-		BPHYT_RS14695	0.52	+0.4
3,348,820	+		BPHYT_RS14695	0.78	-0.4
3,348,820	+		BPHYT_RS14695	0.78	+0.4
3,348,826	+		BPHYT_RS14695	0.79	+1.0
3,348,827	-		BPHYT_RS14695	0.79	-0.4
3,348,827	-		BPHYT_RS14695	0.79	-1.1
3,349,051	-				-1.5
3,349,876	+				+0.4
3,349,876	+				+0.2
3,349,877	-				-1.6
3,349,910	-				-0.2
3,350,050	+				-1.0
3,350,050	+				-0.6
3,350,050	+				-0.3