Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS13485

Experiment: 36hr PHYTO9 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO9 MOI 1
3,077,094	+				-0.8
3,077,136	-				+1.8
3,077,183	+				-2.2
3,077,929	-				+0.2
3,077,937	+				+1.8
3,077,964	+				-0.6
3,077,964	+				+1.0
3,078,241	-				-1.0
3,078,654	-				-0.1
3,078,676	+				+1.2
3,078,908	+		BPHYT_RS13490	0.45	-0.4
3,078,909	-		BPHYT_RS13490	0.45	-0.5
3,078,981	-		BPHYT_RS13490	0.62	-0.3
3,079,201	+				+2.0
3,079,201	+				+0.4
3,079,202	-				-0.1
3,079,202	-				-1.3
3,079,215	+				+0.2
3,079,216	-				+0.8
3,079,216	-				-0.1
3,079,353	-		BPHYT_RS13495	0.36	+2.4