Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS13065

Experiment: 36hr PHYTO9 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO9 MOI 1
2,984,965	-		BPHYT_RS13055	0.46	-0.8
2,985,724	+				-1.0
2,985,724	+				-0.6
2,985,818	+				+4.3
2,985,819	-				-0.6
2,985,819	-				+0.4
2,985,819	-				-0.3
2,985,819	-				+0.6
2,985,819	-				-0.7
2,985,819	-				+0.5
2,985,957	-		BPHYT_RS13065	0.15	-0.2
2,985,957	-		BPHYT_RS13065	0.15	-1.8
2,986,040	+		BPHYT_RS13065	0.21	-0.5
2,986,074	-		BPHYT_RS13065	0.23	+0.2
2,986,092	-		BPHYT_RS13065	0.24	-0.3
2,986,134	+		BPHYT_RS13065	0.27	-0.5
2,986,134	+		BPHYT_RS13065	0.27	-0.8
2,986,170	-		BPHYT_RS13065	0.30	-1.0
2,986,295	+		BPHYT_RS13065	0.38	-1.4
2,986,295	+		BPHYT_RS13065	0.38	+0.3
2,986,296	-		BPHYT_RS13065	0.38	-0.3
2,986,296	-		BPHYT_RS13065	0.38	-0.4
2,986,331	-		BPHYT_RS13065	0.41	-0.7
2,986,547	+		BPHYT_RS13065	0.56	-0.5
2,986,547	+		BPHYT_RS13065	0.56	-0.7
2,986,551	-		BPHYT_RS13065	0.56	+1.3
2,986,551	-		BPHYT_RS13065	0.56	-0.5
2,986,679	+		BPHYT_RS13065	0.65	-0.1
2,986,679	+		BPHYT_RS13065	0.65	-0.1
2,987,039	+				-0.3
2,987,040	-				-0.4
2,987,061	+				+0.4
2,987,061	+				-0.4
2,987,292	-				-1.4
2,987,303	+				-0.8
2,987,379	-				+0.3
2,987,379	-				-0.9
2,987,414	+				-0.8
2,987,414	+				+0.4
2,987,414	+				+0.4
2,987,627	-		BPHYT_RS13070	0.12	-0.2
2,987,627	-		BPHYT_RS13070	0.12	-1.5
2,987,804	+		BPHYT_RS13070	0.20	-0.8
2,987,804	+		BPHYT_RS13070	0.20	-1.0
2,987,843	+		BPHYT_RS13070	0.21	-0.3
2,987,864	+		BPHYT_RS13070	0.22	+0.3
2,987,865	-		BPHYT_RS13070	0.22	+0.5