Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34845

Experiment: 36hr PHYTO7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO7 MOI 1
3,421,542	-		BPHYT_RS34835	0.88	+1.5
3,421,592	+				-0.9
3,421,593	-				-0.6
3,421,749	-				-0.5
3,421,766	+				+0.7
3,421,767	-				-0.8
3,421,767	-				+0.5
3,422,326	+				-0.3
3,422,354	+				+0.1
3,422,355	-				-0.2
3,422,363	-				+0.1
3,422,363	-				-0.1
3,422,373	-				-1.0
3,422,389	-				+0.4
3,422,435	-				+1.3
3,423,496	-				+0.4
3,423,584	+				+0.3
3,423,627	+				+0.2
3,423,628	-				-0.3
3,423,660	+				-0.3
3,423,710	-		BPHYT_RS34850	0.13	-0.3
3,423,710	-		BPHYT_RS34850	0.13	-0.0
3,423,964	+				-0.0
3,424,451	+		BPHYT_RS34855	0.37	+1.3