Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34650

Experiment: 36hr PHYTO7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO7 MOI 1
3,379,865	-		BPHYT_RS34640	0.88	-0.2
3,379,948	+				+0.1
3,379,949	-				+0.8
3,380,019	+				+0.3
3,380,020	-				-0.8
3,380,020	-				-1.1
3,380,148	-		BPHYT_RS34645	0.14	-2.0
3,380,148	-		BPHYT_RS34645	0.14	-0.1
3,380,154	-		BPHYT_RS34645	0.15	+0.6
3,380,247	+		BPHYT_RS34645	0.29	+0.7
3,380,248	-		BPHYT_RS34645	0.30	-0.8
3,380,635	-		BPHYT_RS34645	0.89	-0.6
3,380,654	+				-0.2
3,380,800	-				+0.9
3,381,094	-		BPHYT_RS34650	0.28	+1.7
3,381,094	-		BPHYT_RS34650	0.28	-1.5
3,381,240	-		BPHYT_RS34650	0.42	-2.1
3,381,642	-		BPHYT_RS34650	0.81	+0.4
3,381,712	-		BPHYT_RS34650	0.88	-0.5
3,381,853	+				+0.4
3,381,854	-				+0.9
3,382,236	+		BPHYT_RS34655	0.32	-2.1
3,382,780	+		BPHYT_RS34655	0.78	-1.6