Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34170

Experiment: 36hr PHYTO7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO7 MOI 1
3,269,302	-		BPHYT_RS34165	0.44	-0.1
3,269,545	-		BPHYT_RS34165	0.61	+0.8
3,269,559	+		BPHYT_RS34165	0.62	+0.0
3,269,560	-		BPHYT_RS34165	0.62	+0.6
3,269,854	-		BPHYT_RS34165	0.83	-1.0
3,269,871	+		BPHYT_RS34165	0.85	-0.3
3,269,871	+		BPHYT_RS34165	0.85	-0.5
3,270,292	+		BPHYT_RS34170	0.11	-0.9
3,270,293	-		BPHYT_RS34170	0.11	+0.1
3,270,293	-		BPHYT_RS34170	0.11	-2.1
3,270,293	-		BPHYT_RS34170	0.11	+0.7
3,270,553	+		BPHYT_RS34170	0.49	+0.0
3,270,748	+		BPHYT_RS34170	0.77	+0.7
3,270,794	+		BPHYT_RS34170	0.84	+1.0
3,270,794	+		BPHYT_RS34170	0.84	+1.2
3,270,794	+		BPHYT_RS34170	0.84	+0.3
3,270,794	+		BPHYT_RS34170	0.84	+0.6
3,270,795	-		BPHYT_RS34170	0.84	+0.7
3,270,795	-		BPHYT_RS34170	0.84	+0.6
3,270,795	-		BPHYT_RS34170	0.84	+1.0
3,270,795	-		BPHYT_RS34170	0.84	+0.8
3,270,984	+				+0.9
3,270,985	-				+0.2
3,270,985	-				+1.9
3,270,985	-				+0.1
3,270,989	+				-0.5
3,270,990	-				-0.6
3,270,990	-				+1.5
3,271,164	+				+0.5
3,271,164	+				+0.2
3,271,165	-				+1.1
3,271,314	-		BPHYT_RS34175	0.11	+0.4
3,271,488	-		BPHYT_RS34175	0.27	-0.2
3,271,794	+		BPHYT_RS34175	0.55	+0.5