Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS32980

Experiment: 36hr PHYTO7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO7 MOI 1
2,976,086	+		BPHYT_RS32970	0.81	-0.1
2,976,331	-				-0.1
2,976,584	+				-1.1
2,976,720	+				-0.1
2,977,390	+		BPHYT_RS32980	0.23	-1.3
2,977,391	-		BPHYT_RS32980	0.23	-0.1
2,977,391	-		BPHYT_RS32980	0.23	-0.1
2,977,456	-		BPHYT_RS32980	0.27	-2.5
2,977,486	-		BPHYT_RS32980	0.29	-0.6
2,977,529	+		BPHYT_RS32980	0.32	-0.4
2,977,624	-		BPHYT_RS32980	0.37	+0.4
2,977,815	+		BPHYT_RS32980	0.48	+0.6
2,977,816	-		BPHYT_RS32980	0.48	+1.9
2,977,818	+		BPHYT_RS32980	0.48	-1.2
2,977,896	+		BPHYT_RS32980	0.53	-0.6
2,978,335	-		BPHYT_RS32980	0.79	-1.1
2,978,352	+		BPHYT_RS32980	0.80	-1.1
2,978,440	-		BPHYT_RS32980	0.85	-2.4
2,978,706	+				+0.2
2,978,904	-				-1.3
2,979,028	+				-1.7
2,979,029	-				-0.8
2,979,029	-				+0.1
2,979,104	-				-0.1
2,979,119	+				+0.6
2,979,120	-				+0.3
2,979,203	-				+0.3
2,979,384	+		BPHYT_RS32985	0.28	-0.5
2,979,453	-		BPHYT_RS32985	0.36	-0.4
2,979,508	+		BPHYT_RS32985	0.42	-0.4