Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS24250

Experiment: 36hr PHYTO7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO7 MOI 1
1,006,301	-		BPHYT_RS24245	0.64	-0.3
1,006,362	+		BPHYT_RS24245	0.71	-0.9
1,006,419	+		BPHYT_RS24245	0.78	+0.2
1,006,420	-		BPHYT_RS24245	0.78	-0.1
1,006,531	-				-1.3
1,007,247	+		BPHYT_RS24250	0.64	+1.0
1,007,247	+		BPHYT_RS24250	0.64	+0.6
1,007,288	+		BPHYT_RS24250	0.71	-0.6
1,007,353	-		BPHYT_RS24250	0.82	+0.5
1,007,458	+				+0.3
1,007,459	-				-0.4
1,007,459	-				-0.1
1,007,499	-				-0.9
1,007,501	+				+0.3
1,007,502	-				-0.1
1,007,551	+				+1.3
1,007,599	-				+0.2
1,007,658	+				-0.1
1,007,659	-				+0.0
1,007,659	-				+0.3
1,007,663	-				-1.2
1,007,663	-				-0.1
1,007,671	-				+0.7
1,007,675	-				+1.0
1,007,713	-		BPHYT_RS24255	0.20	-0.4
1,007,723	-		BPHYT_RS24255	0.24	-0.7
1,007,880	+		BPHYT_RS24255	0.80	-0.0
1,008,433	-		BPHYT_RS24260	0.31	-0.3