Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS15870
Experiment: 36hr PHYTO7 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 36hr PHYTO7 MOI 1 |
---|---|---|---|---|---|
remove | |||||
3,603,559 | - | BPHYT_RS15865 | 0.74 | +4.0 | |
3,603,624 | + | BPHYT_RS15865 | 0.79 | -0.7 | |
3,603,625 | - | BPHYT_RS15865 | 0.79 | -0.7 | |
3,603,748 | - | BPHYT_RS15865 | 0.88 | +0.4 | |
3,603,926 | - | -0.0 | |||
3,603,926 | - | +0.2 | |||
3,604,081 | + | -1.9 | |||
3,604,189 | + | +0.2 | |||
3,604,263 | - | -1.8 | |||
3,605,462 | + | -0.4 | |||
3,605,462 | + | -1.1 | |||
3,605,462 | + | -0.4 |
Or see this region's nucleotide sequence