Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS13320
Experiment: 36hr PHYTO7 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 36hr PHYTO7 MOI 1 |
---|---|---|---|---|---|
remove | |||||
3,040,776 | + | BPHYT_RS13315 | 0.42 | -1.7 | |
3,041,330 | + | BPHYT_RS13315 | 0.83 | -1.5 | |
3,041,434 | + | +0.2 | |||
3,041,745 | + | +0.6 | |||
3,041,746 | - | -0.6 | |||
3,041,857 | + | BPHYT_RS13320 | 0.12 | -1.2 | |
3,043,850 | - | BPHYT_RS13325 | 0.74 | +1.7 | |
3,043,875 | - | BPHYT_RS13325 | 0.78 | +0.3 |
Or see this region's nucleotide sequence