Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS12925

Experiment: 36hr PHYTO7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO7 MOI 1
2,948,390	+				-0.2
2,948,462	+				-0.0
2,948,651	-				-3.0
2,948,666	-				-1.2
2,948,776	-				+0.0
2,948,777	+				+1.6
2,948,902	+		BPHYT_RS12920	0.19	-0.0
2,949,182	-				+0.2
2,949,489	-		BPHYT_RS12925	0.24	-1.5
2,950,123	+				-0.9
2,950,347	+		BPHYT_RS12930	0.12	-1.8
2,950,348	-		BPHYT_RS12930	0.12	-0.4
2,950,409	+		BPHYT_RS12930	0.15	-0.5
2,950,472	+		BPHYT_RS12930	0.18	-0.2
2,950,472	+		BPHYT_RS12930	0.18	-1.1
2,950,473	-		BPHYT_RS12930	0.18	+1.6
2,950,473	-		BPHYT_RS12930	0.18	+0.5
2,950,702	-		BPHYT_RS12930	0.29	+0.4
2,950,746	+		BPHYT_RS12930	0.31	-3.0
2,950,747	-		BPHYT_RS12930	0.31	-0.4