Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09920
Experiment: 36hr PHYTO7 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 36hr PHYTO7 MOI 1 |
---|---|---|---|---|---|
remove | |||||
2,259,660 | + | BPHYT_RS09920 | 0.16 | -0.1 | |
2,260,317 | - | BPHYT_RS09920 | 0.63 | -0.7 | |
2,260,817 | + | -0.3 | |||
2,261,321 | + | BPHYT_RS09925 | 0.33 | -0.8 | |
2,261,322 | - | BPHYT_RS09925 | 0.33 | +0.4 | |
2,261,334 | - | BPHYT_RS09925 | 0.34 | +0.3 | |
2,261,658 | - | BPHYT_RS09925 | 0.61 | +0.4 | |
2,261,744 | + | BPHYT_RS09925 | 0.68 | -0.2 |
Or see this region's nucleotide sequence