Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09655

Experiment: 36hr PHYTO7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO7 MOI 1
2,187,152	+				+1.3
2,187,157	+				+0.3
2,187,230	-				-1.9
2,187,331	-				+0.7
2,187,481	-		BPHYT_RS09650	0.36	+2.7
2,187,615	+		BPHYT_RS09650	0.73	+0.3
2,187,616	-		BPHYT_RS09650	0.73	+1.7
2,187,919	+				+2.7
2,187,919	+				+2.5
2,187,919	+				+2.6
2,187,919	+				+2.8
2,187,919	+				+2.8
2,187,965	-				+2.7
2,188,161	+				-1.4
2,188,161	+				-0.7
2,188,161	+				+0.5
2,188,161	+				-0.2
2,188,161	+				+0.5
2,188,161	+				-1.0
2,188,162	-				+1.7
2,188,162	-				-1.7
2,188,262	-		BPHYT_RS09655	0.12	-0.5
2,188,518	+		BPHYT_RS09655	0.33	+2.7
2,188,792	+		BPHYT_RS09655	0.55	-0.1
2,188,792	+		BPHYT_RS09655	0.55	+1.7
2,188,792	+		BPHYT_RS09655	0.55	-0.5
2,188,792	+		BPHYT_RS09655	0.55	+0.3
2,188,792	+		BPHYT_RS09655	0.55	-2.3
2,188,793	-		BPHYT_RS09655	0.55	-1.1
2,188,793	-		BPHYT_RS09655	0.55	-1.1
2,188,793	-		BPHYT_RS09655	0.55	-1.7
2,188,793	-		BPHYT_RS09655	0.55	+0.7
2,188,793	-		BPHYT_RS09655	0.55	+1.7
2,188,793	-		BPHYT_RS09655	0.55	-0.3
2,188,793	-		BPHYT_RS09655	0.55	-0.5
2,189,353	+				+0.1
2,189,359	-				+1.3
2,189,359	-				-1.0
2,189,782	+		BPHYT_RS09660	0.17	+1.2
2,189,782	+		BPHYT_RS09660	0.17	+2.0
2,189,786	-		BPHYT_RS09660	0.17	+1.4
2,189,849	-		BPHYT_RS09660	0.21	+1.3
2,189,864	-		BPHYT_RS09660	0.22	+1.8
2,189,951	-		BPHYT_RS09660	0.29	+2.0
2,190,094	+		BPHYT_RS09660	0.39	+1.0
2,190,145	+		BPHYT_RS09660	0.42	+1.7
2,190,145	+		BPHYT_RS09660	0.42	+1.1
2,190,146	-		BPHYT_RS09660	0.42	-1.1
2,190,146	-		BPHYT_RS09660	0.42	+1.6
2,190,146	-		BPHYT_RS09660	0.42	+2.1