Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09505

Experiment: 36hr PHYTO7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO7 MOI 1
2,152,945	+		BPHYT_RS09500	0.75	+2.6
2,153,020	+		BPHYT_RS09500	0.80	+1.7
2,153,305	+				+2.5
2,153,306	-				+1.9
2,153,352	-				+3.1
2,153,427	+				+1.9
2,153,427	+				+2.1
2,153,428	-				-0.2
2,153,428	-				-0.3
2,153,519	+				-0.1
2,153,519	+				-1.1
2,153,519	+				-1.0
2,153,717	-				-1.7
2,153,886	+		BPHYT_RS09505	0.19	+2.5
2,153,886	+		BPHYT_RS09505	0.19	+0.3
2,153,887	-		BPHYT_RS09505	0.19	-1.1
2,154,021	+		BPHYT_RS09505	0.27	+0.3
2,154,021	+		BPHYT_RS09505	0.27	+0.2
2,154,021	+		BPHYT_RS09505	0.27	-0.5
2,154,021	+		BPHYT_RS09505	0.27	-0.0
2,154,021	+		BPHYT_RS09505	0.27	+0.2
2,154,022	-		BPHYT_RS09505	0.27	+0.4
2,154,244	+		BPHYT_RS09505	0.41	-0.9
2,154,557	+		BPHYT_RS09505	0.61	+2.7
2,154,989	+		BPHYT_RS09505	0.88	-0.6
2,154,999	-		BPHYT_RS09505	0.89	+1.3
2,155,228	+				+0.1
2,155,229	-				-0.5
2,155,233	+				-0.2
2,155,297	-				+0.8