Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09010

Experiment: 36hr PHYTO7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO7 MOI 1
2,037,943	+				+0.0
2,037,943	+				+0.2
2,037,944	-				+0.5
2,037,944	-				+0.3
2,037,944	-				+0.1
2,037,944	-				-1.8
2,038,055	-				-0.4
2,038,060	+				-0.3
2,038,061	-				+1.3
2,038,166	-				+1.6
2,038,203	+				-0.7
2,038,248	+				-0.7
2,038,291	+				-0.1
2,038,348	+		BPHYT_RS09005	0.13	+0.5
2,038,348	+		BPHYT_RS09005	0.13	-0.8
2,038,349	-		BPHYT_RS09005	0.13	+0.6
2,038,361	+		BPHYT_RS09005	0.16	+0.7
2,038,418	+		BPHYT_RS09005	0.27	-0.0
2,038,634	+		BPHYT_RS09005	0.71	+1.9
2,038,637	+		BPHYT_RS09005	0.72	+0.8
2,038,638	-		BPHYT_RS09005	0.72	+3.6
2,038,638	-		BPHYT_RS09005	0.72	-0.1
2,038,850	+		BPHYT_RS09010	0.26	-0.0
2,039,044	+		BPHYT_RS09010	0.69	-0.6
2,039,044	+		BPHYT_RS09010	0.69	-0.8
2,039,321	-				+0.1
2,039,321	-				+2.6
2,039,324	-				+0.1
2,039,359	+				+0.6
2,039,360	-				-0.0
2,039,562	-				+2.6
2,039,699	+		BPHYT_RS09015	0.13	+0.7
2,039,699	+		BPHYT_RS09015	0.13	+0.5
2,039,700	-		BPHYT_RS09015	0.13	-0.9
2,039,768	+		BPHYT_RS09015	0.18	-0.0
2,039,819	+		BPHYT_RS09015	0.22	-0.8
2,039,878	-		BPHYT_RS09015	0.26	+0.1
2,039,878	-		BPHYT_RS09015	0.26	+1.3
2,039,880	-		BPHYT_RS09015	0.26	-0.8
2,040,056	+		BPHYT_RS09015	0.39	-0.8
2,040,056	+		BPHYT_RS09015	0.39	-0.3
2,040,143	+		BPHYT_RS09015	0.45	-0.7
2,040,165	-		BPHYT_RS09015	0.47	-0.4