Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS07310

Experiment: 36hr PHYTO7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO7 MOI 1
1,658,413	+		BPHYT_RS07305	0.41	+1.1
1,658,884	+				-0.2
1,658,884	+				-1.3
1,658,885	-				-0.4
1,658,885	-				-1.0
1,658,953	+				+0.1
1,658,953	+				-0.3
1,658,954	-				-0.5
1,659,090	+		BPHYT_RS07310	0.27	-0.8
1,659,090	+		BPHYT_RS07310	0.27	+1.0
1,659,129	+		BPHYT_RS07310	0.36	+0.2
1,659,130	-		BPHYT_RS07310	0.36	+1.1
1,659,292	-		BPHYT_RS07310	0.74	-0.4
1,659,292	-		BPHYT_RS07310	0.74	-0.2
1,659,292	-		BPHYT_RS07310	0.74	+0.6
1,659,988	-		BPHYT_RS07315	0.40	-0.4
1,660,140	+		BPHYT_RS07315	0.55	-1.5
1,660,140	+		BPHYT_RS07315	0.55	+0.1
1,660,140	+		BPHYT_RS07315	0.55	+0.3
1,660,141	-		BPHYT_RS07315	0.56	+0.2
1,660,141	-		BPHYT_RS07315	0.56	-0.6
1,660,270	-		BPHYT_RS07315	0.69	+0.3
1,660,387	-		BPHYT_RS07315	0.81	+0.7