Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS06870

Experiment: 36hr PHYTO7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO7 MOI 1
1,554,871	+		BPHYT_RS06865	0.26	-1.8
1,555,258	+				+0.5
1,555,311	+				-0.8
1,555,325	-				-0.9
1,555,398	+				+0.1
1,555,398	+				+0.2
1,555,399	-				-0.4
1,555,408	+				+0.8
1,555,555	+				-0.2
1,555,684	+				-0.1
1,555,764	-				-0.7
1,555,784	-				+0.2
1,555,946	-		BPHYT_RS06870	0.25	+1.1
1,555,946	-		BPHYT_RS06870	0.25	-1.2
1,556,132	-		BPHYT_RS06870	0.79	+0.2
1,556,132	-		BPHYT_RS06870	0.79	-0.7
1,556,132	-		BPHYT_RS06870	0.79	+0.4
1,556,133	+		BPHYT_RS06870	0.79	+1.3
1,556,134	-		BPHYT_RS06870	0.79	-0.6
1,556,134	-		BPHYT_RS06870	0.79	+0.6
1,556,135	+		BPHYT_RS06870	0.79	-0.4
1,556,135	+		BPHYT_RS06870	0.79	+0.1
1,556,135	+		BPHYT_RS06870	0.79	-1.3
1,556,136	-		BPHYT_RS06870	0.80	-0.3
1,556,157	+		BPHYT_RS06870	0.86	-0.1
1,556,157	+		BPHYT_RS06870	0.86	+0.4
1,556,157	+		BPHYT_RS06870	0.86	-1.0
1,556,158	-		BPHYT_RS06870	0.86	-0.6
1,556,158	-		BPHYT_RS06870	0.86	-0.2
1,556,158	-		BPHYT_RS06870	0.86	-0.1
1,556,203	+				-2.4
1,556,338	-				-2.0
1,556,358	+				+0.1
1,556,375	+				-2.6
1,556,626	+				-1.0
1,556,626	+				-1.0
1,556,681	+				+0.5
1,556,781	+		BPHYT_RS06875	0.14	-0.7
1,556,782	-		BPHYT_RS06875	0.14	+1.1
1,556,782	-		BPHYT_RS06875	0.14	-0.5
1,556,784	+		BPHYT_RS06875	0.14	-1.1
1,556,785	-		BPHYT_RS06875	0.14	-1.0
1,556,817	+		BPHYT_RS06875	0.17	-0.0
1,557,194	-		BPHYT_RS06875	0.53	+0.3