Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS06860

Experiment: 36hr PHYTO7 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO7 MOI 1
1,553,465	+				+1.1
1,553,465	+				-2.3
1,553,465	+				+0.9
1,553,466	-				-1.4
1,553,466	-				+0.6
1,553,542	+				+0.9
1,553,584	-		BPHYT_RS06855	0.13	-0.2
1,553,584	-		BPHYT_RS06855	0.13	-0.8
1,553,614	-		BPHYT_RS06855	0.16	+0.1
1,553,675	+		BPHYT_RS06855	0.23	+0.3
1,553,676	-		BPHYT_RS06855	0.23	+1.0
1,553,762	-		BPHYT_RS06855	0.32	+0.6
1,553,979	+		BPHYT_RS06855	0.56	+0.2
1,553,979	+		BPHYT_RS06855	0.56	+0.4
1,553,979	+		BPHYT_RS06855	0.56	+1.6
1,553,979	+		BPHYT_RS06855	0.56	+0.2
1,553,980	-		BPHYT_RS06855	0.56	+0.5
1,553,980	-		BPHYT_RS06855	0.56	+0.4
1,553,988	-		BPHYT_RS06855	0.57	+0.8
1,554,023	+		BPHYT_RS06855	0.61	-0.3
1,554,051	-		BPHYT_RS06855	0.64	+1.3
1,554,057	+		BPHYT_RS06855	0.64	-0.6
1,554,615	+				+0.4
1,554,616	-				+0.7
1,554,676	+				-0.2
1,554,676	+				+0.5
1,554,676	+				+0.2
1,554,677	-				+0.3
1,554,728	+				-0.5
1,554,728	+				+1.3
1,554,729	-				+0.3
1,554,816	+		BPHYT_RS06865	0.13	-0.1
1,554,816	+		BPHYT_RS06865	0.13	-1.0
1,554,817	-		BPHYT_RS06865	0.14	-0.6
1,554,871	+		BPHYT_RS06865	0.26	-1.8
1,555,258	+				+0.5
1,555,311	+				-0.8
1,555,325	-				-0.9
1,555,398	+				+0.1
1,555,398	+				+0.2
1,555,399	-				-0.4
1,555,408	+				+0.8
1,555,555	+				-0.2